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1.
Rev. colomb. biotecnol ; 22(2): 35-43, jul.-dic. 2020. tab, graf
Article in English | LILACS-Express | LILACS | ID: biblio-1156286

ABSTRACT

ABSTRACT Use of biotechnological potential of native microorganisms as bio-inputs is having a great impact on agricultural systems. Plant Growth Promoting Rhizobacteria (PGPR), in addition to their beneficial effect on plant growth and on the availability of soil elements, also have an antagonistic effect against different pathogens. In this study, growth promotion mechanisms with emphasis on the antagonism of PGPR isolated from sugarcane and tomato crops were evaluated. Antagonism against Fusarium oxysporum f.sp lycopersici (Fol) was determined by dual tests, inhibition of germination and production of chitinases and endoglucanases. 52 isolates were evaluated and according to their results in dual tests 10 were selected for further analysis. Isolate GIBI127 showed the best percentage of Inhibition Germination (IG) of Fol (59.29%). Then, a selection index was calculated using results from gi, dual tests and growth promotion mechanisms to select five best isolates. Finally, these bacteria were evaluated for chitinases and endoglucanases production using Miller's method. As a result, strain GIBI419 (Burkholderia cepacia) showed a higher production of these enzymes. Selected isolates have antagonistic potential along with plant growth promotion characteristics, which can be used for the development of microbial inoculants which allow the establishment of agricultural systems for tomato cultivation that are sustainable, efficient, and environmentally friendly.


RESUMEN El uso del potencial biotecnológico de microorganismos nativos como bioinsumos está teniendo un gran impacto en los sistemas agrícolas. Las rizobacterias promotoras del crecimiento vegetal (PGPR), además de su efecto benéfico en el crecimiento de las plantas y de facilitar la disponibilidad de elementos del suelo, también tienen un efecto antagónico frente a diferentes patógenos. En este estudio se evaluaron mecanismos de promoción del crecimiento con énfasis en el antagonismo de bacterias PGPR aisladas de cultivos de caña de azúcar y tomate. El antagonismo contra Fusarium oxysporum f.sp lycopersici (Fol) se determinó mediante pruebas duales, inhibición de la germinación y producción de quitinasas y endoglucanasas. Se evaluaron 52 aislamientos y según sus resultados en pruebas duales se seleccionaron 10 para su posterior análisis. El aislado GIBI127 mostró el mejor porcentaje de Inhibición de la Germinación (IG) de Fol (59,29%). Luego, se calculó un índice de selección utilizando los resultados de IG, pruebas duales y mecanismos de promoción del crecimiento para seleccionar los cinco mejores aislamientos. Finalmente, estas bacterias fueron evaluadas en la producción de quitinasas y endoglucanasas utilizando el método de Miller. Como resultado, se evidenció la cepa GIBI419 (Burkholderia cepacia) como la de mayor producción de estas enzimas. Los aislados seleccionados tienen un potencial antagónico junto con características de promoción del crecimiento de las plantas, que pueden usarse para el desarrollo de inoculantes microbianos que permitan el establecimiento de sistemas agrícolas para el cultivo de tomate que sean sostenibles, eficientes y amigables con el medio ambiente.

2.
Article | IMSEAR | ID: sea-209910

ABSTRACT

Aspergillus niger isolated from the soil was investigated for its capability to produce various lignocellulolyticenzymes, such as LiP, endoglucanase, FPase, xylanase by solid-state fermentation, using Albizia lebbeck fruitpods as a substrate. The chemical composition of the fruit pods was studied, and the production pattern of theenzymes was examined by growing the fungi for 25 days. The LiP activity was low, whereas a good productionof endoglucanase, FPase, and xylanase enzymes was noted. A dye decolorization capacity of the A. niger wasalso studied with Congo red. Therefore, A. lebbeck fruit pods which are considered as waste and burnt off canbe utilized for the production of holocellulolytic enzymes using A. niger.

3.
Chinese Journal of Biotechnology ; (12): 2193-2205, 2020.
Article in Chinese | WPRIM | ID: wpr-878478

ABSTRACT

Endoglucanase (EG) is an important component of cellulases and play an important role in cellulose degradation. However, its application is limited due to the low yield of endoglucanase from natural microorganisms. Efficient heterologous expression of endoglucanase is an effective way to solve this problem. To obtain the engineered Saccharomyces cerevisiae for high-yield endoglucanase, endoglucanase gene was cloned from Clostridium cellulovorans, with a total length of 1 996 bp, encoding 440 amino acids, and the complete expression cassette (PαEGC) was constructed with the PGK promoter sequence from Saccharomyces cerevisiae, α-signal peptide sequence from pPIC9K plasmid and CYC1 terminator sequence from pSH65 plasmid by gene splicing by overlap extension PCR (SOE PCR), and the expression vector of endoglucanase in Saccharomyces cerevisiae was constructed by rDNA integration. The relationship between copy number and protein expression was explored. Random multicopy expression of endoglucanase was performed in Saccharomyces cerevisiae. The copy number of endoglucanase was identified by Droplet Digital PCR and explore the relationship between copy number and protein expression.The engineered Saccharomyces cerevisiae of endoglucanase with copy numbers of 1, 3, 4, 7, 9, 11, 15, 16, 19, 21, 22 and 23 were obtained by rDNA integration, respectively. The results showed that when the copy number was 15, the enzyme activity was the highest, namely 351 U/mL. The engineered strain of Saccharomyces cerevisiae for endoglucanase was successfully constructed, which can provide reference for the heterologous expression of other industrial enzymes.


Subject(s)
Cellulase/genetics , Genetic Engineering , Industrial Microbiology , Plasmids/genetics , Saccharomyces cerevisiae/genetics
4.
Mycobiology ; : 50-58, 2019.
Article in English | WPRIM | ID: wpr-760527

ABSTRACT

Agarum clathratum, a brown macroalgae species, has recently become a serious environmental problem on the coasts of Korea. In an effort to solve this problem, fungal diversity associated with decaying A. clathratum was investigated and related β-glucosidase and endoglucanase activities were described. A total of 233 fungal strains were isolated from A. clathratum at 15 sites and identified 89 species based on morphology and a multigene analysis using the internal transcribed spacer region (ITS) and protein-coding genes including actin (act), β-tubulin (benA), calmodulin (CaM), and translation elongation factor (tef1). Acremonium, Corollospora, and Penicillium were the dominant genera, and Acremonium fuci and Corollospora gracilis were the dominant species. Fifty-one species exhibited cellulase activity, with A. fuci, Alfaria terrestris, Hypoxylon perforatum, P. madriti, and Pleosporales sp. Five showing the highest enzyme activities. Further enzyme quantification confirmed that these species had higher cellulase activity than P. crysogenum, a fungal species described in previous studies. This study lays the groundwork for bioremediation using fungi to remove decaying seaweed from populated areas and provides important background for potential industrial applications of environmentally friendly processes.


Subject(s)
Acremonium , Actins , Biodegradation, Environmental , Calmodulin , Cellulase , Fungi , Korea , Penicillium , Peptide Elongation Factors , Seaweed
5.
Article | IMSEAR | ID: sea-187885

ABSTRACT

The bioconversion of cellulose and hemicellulose to soluble sugars is important for global stabilization and for a sustainable human society. Here, hundreds of cellulolytic bacteria were found in soil, compost and animal waste slurry of our environment. Bacillus spp. are aerobic cellulolytic bacteria. Here, two Bacillus strains 2414, 2579 (T) and their mixed culture utilized for measuring the cellulolytic potential. The capability of cellulolytic potential was analyzed by enriching the basal salt media with Whatman no.1 filter paper as a substrate for cellulose degradation. Here, Cellulose-degrading potential of Bacillus strains was measured by measuring the diameter of a clear zone around the colony and its hydrolytic value on cellulose Congo-Red agar media. The extracellular cellulase activities ranged from 0.08233 to 0.44 IU/mL for FPase and 0.243 to 0.595 IU/mL for endoglucanase assay. The maximum activities range of β-glucosidase or cellobiase activity was 0.6 to1.5 1U/ml. The maximum xylanase activities value Bacillus cellulolysticus 2579 (T), Bacillus subtilis 2414 and their mixed culture were 12.0,11.5 and 12.5 unit/mL, respectively. All the enzymes were stable at an optimum pH range value of 3.0-7.0 and temperature range of 30˚C-50˚C. The maximum filter paper degradation percentage was estimated to be 71.76% by mixed culture after 48hrs of incubation period, it was observed that the maximum filter paper degradation was done by mixed culture than Bacillus strains. Biodiesel production was estimated by following the EN-14103 method and ester content was calculated on the basis of response factor with a minimum set value of ester content will be 96.5%.

6.
Article | IMSEAR | ID: sea-187830

ABSTRACT

Among the various microorganisms reported for their capabilities of cellulases and xylanases production, fungi are the most potent producers. This study reports the production of xylanolytic and cellulolytic enzymes by potential decomposing fungal isolates using a cheap medium containing green manure substrate and chemically defined basal medium under solid-state culture. A number of decomposing fungi were screened for cellulolytic and xylanolytic potential. The enzyme production with purified carboxy methyl cellulose (CMC) and birch wood xylan was studied and found to be promising. Aspergillus niger produced the highest amount of endoglucanase and xylanase viz., 3.635 U mg-1 protein min-1 and 2498.20 U mg-1 protein min-1, respectively at 25ºC. Growth and enzyme production was affected by the alterations in temperature. Highest production of endoglucanse and xylanase were noted at 25ºC and 30ºC.

7.
Electron. j. biotechnol ; 31: 84-92, Jan. 2018. graf, tab, ilus
Article in English | LILACS | ID: biblio-1022139

ABSTRACT

Background: Cellulolytic enzymes of microbial origin have great industrial importance because of their wide application in various industrial sectors. Fungi are considered the most efficient producers of these enzymes. Bioprospecting survey to identify fungal sources of biomass-hydrolyzing enzymes from a high-diversity environment is an important approach to discover interesting strains for bioprocess uses. In this study, we evaluated the production of endoglucanase (CMCase) and ß-glucosidase, enzymes from the lignocellulolytic complex, produced by a native fungus. Penicillium sp. LMI01 was isolated from decaying plant material in the Amazon region, and its performance was compared with that of the standard isolate Trichoderma reesei QM9414 under submerged fermentation conditions. Results: The effectiveness of LMI01 was similar to that of QM9414 in volumetric enzyme activity (U/mL); however, the specific enzyme activity (U/mg) of the former was higher, corresponding to 24.170 U/mg of CMCase and 1.345 U/mg of ß-glucosidase. The enzymes produced by LMI01 had the following physicochemical properties: CMCase activity was optimal at pH 4.2 and the ß-glucosidase activity was optimal at pH 6.0. Both CMCase and ß-glucosidase had an optimum temperature at 60°C and were thermostable between 50 and 60°C. The electrophoretic profile of the proteins secreted by LMI01 indicated that this isolate produced at least two enzymes with CMCase activity, with approximate molecular masses of 50 and 35 kDa, and ß-glucosidases with molecular masses between 70 and 100 kDa. Conclusions: The effectiveness and characteristics of these enzymes indicate that LMI01 can be an alternative for the hydrolysis of lignocellulosic materials and should be tested in commercial formulations.


Subject(s)
Penicillium/enzymology , Cellulase/biosynthesis , beta-Glucosidase/biosynthesis , Oligosaccharides , Temperature , Trichoderma/enzymology , Enzyme Stability , Cellulase/metabolism , beta-Glucosidase/metabolism , Amazonian Ecosystem , Biocatalysis , Fermentation , Hydrogen-Ion Concentration , Hydrolysis , Lignin/metabolism
8.
Malaysian Journal of Microbiology ; : 554-562, 2018.
Article in English | WPRIM | ID: wpr-751191

ABSTRACT

Aims@#The methylotrophic yeast Pichia pastoris is widely used to express foreign proteins fused to secretion signals. As the effect of the expression host on the final protein product is unclear, we compared the properties of an endoglucanase (eglB of Aspergillus niger) expressed in two different P. pastoris strains. @*Methodology and results@#Full-length cDNA encoding endoglucanase of A. niger strain ATCC10574 was isolated and expressed in P. pastoris X33 (the methanol utilisation plus phenotype, Mut+) and P. pastoris GS115 (slow methanol utilisation, MutS). EglB-GS115 showed the highest activity and stability at 60 °C while EglB-X33 was most active at 50 °C. EglB-X33 was active towards other substrates such as arabinogalactan, guar gum and locust bean gum besides its specific substrate, carboxymethyl cellulose (CMC). However, EglB-GS115 was only active on CMC. The affinity of EglB-X33 towards CMC (Km = 7.5 mg/mL and specific activity 658 U/mg) was higher than that of EglB-GS115 (Km = 11.57 mg/mL, specific activity 144 U/mg). @*Conclusion, significance and impact of study@#Although eglB was cloned in the same expression vector (pPICZαC), two different characteristics of enzymes were recovered from the supernatant of the different hosts. Thus, expression of recombinant enzyme in different P. pastoris strains greatly affects the physical structure and biochemical properties of the enzyme.

9.
Malaysian Journal of Microbiology ; : 547-553, 2018.
Article | WPRIM | ID: wpr-751190

ABSTRACT

Aims@#The cellulase complexes of Trichoderma reesei are relatively low in endoglucanase and β-glucosidase activity compared with exoglucanase. The aim of this study is to determine the effect of Humicola insolens recombinant endoglucanase on the activities of commercial cellulases, Celluclast® and Acellerase® BG, during the hydrolysis of pretreated oil palm empty fruit bunch (OPEFB) fibres to simple sugars. @*Methodology and results@#An endoglucanase (CMC3) from H. insolens ATTC 16454 was expressed in Pichia pastoris. The recombinant protein was purified and verified by SDS-PAGE and Western blot. The enzymatic hydrolysis of OPEFB fibres was carried out at 55 °C for 72 h and 1:40 and 1:100 mixtures of CMC3 and Celluclast® were used. All reaction mixtures were added with commercial β-glucosidase, Accelerase® BG, at a fixed concentration of 116 mg/mL. The sugars produced were analysed by high-performance liquid chromatography. Two sugar peaks were successfully resolved at different retention times and were identified as xylose and glucose. At Celluclast®-to-CMC3 activity ratio of 1:100, the highest reducing sugar concentration was obtained, whereby the glucose and xylose production increased by ~59% and ~27%, respectively. @*Conclusion, significance and impact of study@#Recombinant CMC3 can act synergistically with Celluclast® and Accelerase® BG to increase the production of glucose and xylose from pretreated OPEFB fibre. This study contributes greatly towards the development of efficient cellulase enzyme cocktail for the efficient hydrolysis of OPEFB biomass and the production of simple and fermentable sugars.

10.
Electron. j. biotechnol ; 27: 70-79, May. 2017. tab, ilus, graf
Article in English | LILACS | ID: biblio-1010399

ABSTRACT

Background: Endoglucanase plays a major role in initiating cellulose hydrolysis. Various wild-type strains were searched to produce this enzyme, but mostly low extracellular enzyme activities were obtained. To improve extracellular enzyme production for potential industrial applications, the endoglucanase gene of Bacillus subtilis M015, isolated from Thai higher termite, was expressed in a periplasmic-leaky Escherichia coli. Then, the crude recombinant endoglucanase (EglS) along with a commercial cellulase (Cel) was used for hydrolyzing celluloses and microbial hydrolysis using whole bacterial cells. Results: E. coli Glu5 expressing endoglucanase at high levels was successfully constructed. It produced EglS (55 kDa) with extracellular activity of 18.56 U/mg total protein at optimal hydrolytic conditions (pH 4.8 and 50°C). EglS was highly stable (over 80% activity retained) at 40­50°C after 100 h. The addition of EglS significantly improved the initial sugar production rates of Cel on the hydrolysis of carboxymethyl cellulose (CMC), microcrystalline cellulose, and corncob about 5.2-, 1.7-, and 4.0-folds, respectively, compared to those with Cel alone. E. coli Glu5 could secrete EglS with high activity in the presence of glucose (1% w/v) and Tween 80 (5% w/v) with low glucose consumption. Microbial hydrolysis of CMC using E. coli Glu5 yielded 26 mg reducing sugar/g CMC at pH 7.0 and 37°C after 48 h. Conclusions: The recombinant endoglucanase activity improved by 17 times compared with that of the native strain and could greatly enhance the enzymatic hydrolysis of all studied celluloses when combined with a commercial cellulase.


Subject(s)
Bacillus subtilis/enzymology , Cellulase/metabolism , Isoptera/microbiology , Thailand , Recombinant Proteins/metabolism , Cellulase/genetics , Cellulose , Gene Amplification , Agriculture , Escherichia coli/metabolism , Hydrolysis
11.
Electron. j. biotechnol ; 19(6): 56-62, Nov. 2016. ilus
Article in English | LILACS | ID: biblio-840314

ABSTRACT

Background: Endoglucanase, one of three type cellulases, can randomly cleave internal p-1,4-linkages in cellulose polymers. Thus, it could be applied in agricultural and industrial processes. Results: A novel endoglucanase gene (JqCel5A) was cloned from Jonesia quinghaiensis and functionally expressed in Escherichia coli Rosetta (DE3). It contained 1722 bp and encoded a 573-residue polypeptide consisting of a catalytic domain of glycoside hydrolase family 5 (GH5) and a type 2 carbohydrate-binding module (CBM2), together with a predicted molecular mass of 61.79 kD. The purified JqCel5A displayed maximum activity at 55°C and pH 7.0, with 21.7 U/mg, 26.19 U/mg and 4.81 U/mg towards the substrate carboxymethyl cellulose, barley glucan and filter paper, respectively. Interestingly, JqCel5A exhibited high pH stability over a broad pH range of pH (3-11), and had good tolerance to a wide variety of deleterious chemicals including heavy metals and detergent. The catalytic mechanism of JqCel5A was also investigated by site mutagenesis and homology-modeling in this study. Conclusions: It was believed that these properties might make JqCel5A to be potentially used in the suitable industrial catalytic condition, which has a broad pH fluctuation and/or chemical disturbance.


Subject(s)
Actinomycetales/enzymology , Cellulases/chemistry , Cellulases/isolation & purification , Cellulases/genetics , Hydrogen-Ion Concentration , Mutagenicity Tests , Temperature
12.
Braz. j. microbiol ; 46(4): 1225-1234, Oct.-Dec. 2015. graf
Article in English | LILACS | ID: lil-769670

ABSTRACT

Abstract This study aimed to isolate and evaluate the cellulase activity of cellulolytic bacteria in hot springs of Dehloran, Ilam province, Iran. Water and sludge samples were collected from the hot springs and the bacterial enrichment was performed in a medium containing rice barn and carboxymethyl cellulose (CMC). The cultures were incubated at 50 °C in aerobic conditions. The bacteria were isolated on CMC agar (1%) medium. Cellulase assay of the isolates was measured by the evaluation of endoglucanase enzyme activity, which is also called as carboxymethyl cellulase (CMCase). The isolated thermotolerant bacteria were then identified and optimized for the production of CMCase. Moreover, stabilizing elements of the enzyme were identified with in silico approach. The chosen isolate was identified as Isoptericola variabilis sp. IDAH9. The identified strain produced the most thermostable CMCase at a concentration of 5.6 g/L of ammonium sulfate, 9 g/L CMCase or 12 g/L rice bran, 0/6% Tween-80, and 0.2% sucrose. The produced enzyme showed 80% of the residual activity after 1 h of incubation at 65 °C. In silico data indicated that the remaining residual activity was due to the redundant stabilizing elements in the protein structure. Consequently, I. variabilis can be isolated from the extreme environment and has a thermostable endoglucanase which may be used for various applications after studying them.


Subject(s)
Female , Humans , Male , Middle Aged , Depressive Disorder/epidemiology , Diabetes Mellitus/epidemiology , Forecasting/methods , Health Policy , Mass Screening/legislation & jurisprudence , Artificial Intelligence , Comorbidity , Comparative Effectiveness Research/methods , Decision Support Techniques , Delivery of Health Care, Integrated , Diabetes Complications , Diagnostic and Statistical Manual of Mental Disorders , Depressive Disorder/diagnosis , Depressive Disorder/psychology , Diabetes Mellitus/diagnosis , Diabetes Mellitus/psychology , Logistic Models , Mass Screening/standards , Policy Making , Predictive Value of Tests , Safety-net Providers , Self Care , Surveys and Questionnaires
13.
Electron. j. biotechnol ; 18(2): 103-109, Mar. 2015. ilus, graf, tab
Article in English | LILACS | ID: lil-745577

ABSTRACT

Background Bacillus subtilis UMC7 isolated from the gut of termite Macrotermes malaccensis has the ability to secrete a significant amount of extracellular endoglucanase, with an enzyme activity of 0.12 ± 0.01 μmol/min/mL. However, for economically viable industrial applications, the enzyme needs to be expressed in a heterologous host to overcome the low enzyme production from the wild-type strain. Results The endoglucanase gene from B. subtilis UMC7 was successfully cloned and expressed. A higher enzyme activity was observed in the intracellular fraction of the recombinant clone (0.51 ± 0.02 μmol/min/mL) compared with the cell-bound fraction (0.37 ± 0.02 μmol/min/mL) and the extracellular fraction (0.33 ± 0.01 μmol/min/mL). The recombinant endoglucanase was approximately 56 kDa, with optimal enzyme activity at 60°C and pH 6.0. The activity of the enzyme was enhanced by the addition of Ca2 +. However, the enzyme was inhibited by other metal ions in the following order: Fe3 + > Ni2 + > Cu2 + > Mn2 + = Zn2 + > Mg2 + > Cd2 + > Cr2 +. The enzyme was able to hydrolyze both low- and high-viscosity carboxymethyl-cellulose (CMC), avicel, cotton linter, filter paper and avicel but not starch, xylan, chitin, pectin and p-nitrophenyl α-d-glucopyranoside. Conclusions The recombinant endoglucanase showed a threefold increase in extracellular enzyme activity compared with the wild-type strain. This result revealed the potential of endoglucanase expression in E. coli, which can be induced for the overexpression of the enzyme. The enzyme has a broad range of activity with high specificity toward cellulose.


Subject(s)
Bacillus subtilis/enzymology , Cellulase/genetics , Cellulase/metabolism , Isoptera , Substrate Specificity , Temperature , Bacillus subtilis/isolation & purification , Recombinant Proteins , Gene Amplification , Cloning, Molecular , Sequence Analysis , Escherichia coli , Hydrogen-Ion Concentration , Intestines/microbiology , Ions , Metals
14.
Br Biotechnol J ; 2015 7(4): 160-168
Article in English | IMSEAR | ID: sea-174745

ABSTRACT

Alkaline cellulases are demanded by the textile industry for several purposes but commercial preparations showing activity at alkaline conditions are very scarce. Aim: To characterize a Penicillium strain isolated form soils of a Peruvian rainforest showing alkaline cellulase activity that may be useful for the textile industry. Methodology: The molecular identification was based on the DNA sequence of its ITS region using ITS1 and ITS4 primers after PCR amplification. Cellulase production was evaluated in shaken flasks by using either lactose or microcrystalline cellulose. Total cellulase (as FPA) and endoglucanase activities were evaluated by the standard methods at several pH levels. Also, the cellulase activity of culture filtrates was tested for antipilling activity as compared to a commercial neutral cellulase preparation. Results: After raw data of ITS DNA sequence was processed, multiple alignment and phylogenetic analysis confirmed that our strain can be named as Penicillium mallochii LMB-HP37. Higher activity was attained for neutral total cellulase on lactose (3371±108 U/l at pH 7.4) and alkaline cellulases attained similar activity levels than the acid cellulase (2978±151 U/l at pH 8.4 and 2910±42 U/l at pH 9.4). FPA and endoglucanase activities were produced at high volumetric (46.8±1.5 and 13.5±1.0 U/l.h, respectively) and specific (32.9±1.1 and 9.5±0.7 U/gbiomass.h, respectively) productivities at the same pHs which indicate that this strain may be suitable for commercial development. The enzyme of P. mallochii LMB-HP37 had slightly better results than the commercial enzyme as an anti-pilling agent even though is a crude preparation. Conclusion: Penicillium mallochii LMB-HP37 produced high total cellulase activity on lactose which compares to well-known cellulase producers but at neutral to alkaline pH levels. Data obtained reveal that the crude enzyme is suitable for anti-pilling process (biopolishing) and may be also useful for biostoning.

15.
Article in English | IMSEAR | ID: sea-179891

ABSTRACT

Endoglucanase (EC3.2.1.4) from sorghum (S. bi-color) and millet (Pennisetum typhoides & Digitaria exilis) malts were purified to homogeneity through the methods of ammonium sulphate precipitation and gel filtration. Molecular mass of 35 KDa and 41 KDa were determined by SDS-PAGE. The purified enzymes catalyzed the hydrolysis of carboxy-methylcellulose with optimum activity at pH of 4.8, 5.0, 6.0, and temperature of 60ºC, 60ºC and 70ºC for Digitaria exilis, S. bi-color and Pennisetum typhoides respectively. More than 90% activity was retained in S. bi-color and Pennisetum typhoides and 73% activity in Digitaria exilis after 1.0 hour pre-incubation at 60ºC. Km values of 0.11, 0.09, 0.20 mM and Vmax 17.53, 15.0 and 11.10 U/mg/min were obtained for S. bi-color, Pennisetum typhoides and Digitaria exilis respectively. Co2+ inhibited endoglucanase activity whereas Ca2+, Ba2+, and Zn2+ enhanced enzyme activity. The enzyme was inactivated by glucose, a major end product of cellulose hydrolysis. Results indicate that endoglucanase of S. bi-color and Pennisetum typhoides are more suitable for malting and a blend of the two will produce high quality malt.

16.
Article in English | IMSEAR | ID: sea-179783

ABSTRACT

Aims: Clostridium thermocellum is a thermophilic, anaerobic bacterium that ferments cellulose and produces ethanol. While many of the predicted cellulases have been characterized from C. thermocellum, characterization of additional members is still needed to unravel the function of these enzymes. Study Design: This report describes the first cloning, expression, characterization, and evaluation in cellulose degradation of Clostridium thermocellum Cel5L as well as its relationship to other cellulases. Results: Cel5L, a 526 amino acid protein that shows low homology to other cellulases of C. thermocellum, possesses both endo and exo activity on -glucan, carboxymethylcellulose, and cellooligosaccharides; the enzyme does not hydrolyze xylan, xyloglucan or glucomannan. When combined with exo-cellulases and -glucosidase, Cel5L generates more glucose from cellulose than other tested C. thermocellum GH5 cellulases, which is surprising due to the lack of an annotated carbohydrate binding module. The Cel5L phylogenetic tree shows orthologs in both mesophilic and thermophilic cellulose degraders. Conclusion: The presence of these orthologs in a variety of molecular constructs demonstrates the importance of Cel5L and its orthologs in cellulose degradation, both in C. thermocellum as well as other gram-positive cellulose degraders.

17.
Braz. j. microbiol ; 45(4): 1211-1220, Oct.-Dec. 2014. graf, mapas, tab
Article in English | LILACS | ID: lil-741270

ABSTRACT

A systematized survey was conducted to find soil-borne microbes that degrade cellulose in soils from unique ecosystems, such as the Superpáramo, Páramo, and the High Andean Forest in the Nevados National Natural Park (NNNP), Colombia. These high mountain ecosystems represent extreme environments, such as high levels of solar radiation, low atmospheric pressure, and extreme daily changes in temperature. Cellulolytic activity of the microorganisms was evaluated using qualitative tests, such as growth in selective media followed by staining with congo red and iodine, and quantitative tests to determine the activity of endoglucanase, β-glucosidase, exoglucanase, and total cellulase. Microorganisms were identified using molecular markers, such as the 16S rRNA gene for bacteria and the internal transcribed spacer region (ITS) of ribosomal DNA for fungi. Multivariate statistical analysis (MVA) was used to select microorganisms with high cellulolytic capacity. A total of 108 microorganisms were isolated from the soils and, in general, the enzymatic activities of fungi were higher than those of bacteria. Our results also found that none of the organisms studied were able to degrade all the components of the cellulose and it is therefore suggested that a combination of bacteria and/or fungi with various enzymatic activities be used to obtain high total cellulolytic activity. This study gives an overview of the potential microorganism that could be used for cellulose degradation in various biotechnological applications and for sustainable agricultural waste treatment.


Subject(s)
Bacteria/isolation & purification , Bacteria/metabolism , Cellulose/metabolism , Fungi/isolation & purification , Fungi/metabolism , Soil Microbiology , Bacteria/classification , Bacteria/genetics , Colombia , Cellulase/analysis , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Helminth/chemistry , DNA, Helminth/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Fungi/classification , Fungi/genetics , Hydrolysis , /genetics , Sequence Analysis, DNA
18.
Univ. sci ; 19(3): 323-332, sep.-dic. 2014. ilus
Article in Spanish | LILACS-Express | LILACS | ID: lil-735239

ABSTRACT

A partir de una mancha de enmohecido de un libro del Archivo "Coronado" con valor patrimonial, se obtuvo una cepa fúngica mediante aislamiento en medio de cultivo micológico. La cepa fué Aspergillus sclerotiorum y se identificó por secuenciación de ADN ribosomal. Se evaluó y confirmó su capacidad deteriorante sobre el papel, al determinar cualitativamente las actividades enzimáticas celulolítica, proteolítica y amilolítica, así como la producción de pigmentos y ácidos. Se evaluaron cuantitativamente sus actividades enzimáticas celulasa total sobre papel de filtro (FPasa) y &beta-endoglucanasa, FPasa y &beta-endoglucanasa; confirmando actividades bajas. Aunque su capacidad deteriorante es discreta, resulta ser amenza para la conservación del documento y potencialmente peligroso para la salud de las personas que consultan y archivan.


By performing a mycological culture, we isolated a fungal strain from a mold patch in a book of great heritage value from the "Coronado" archives. Ribosomal DNA sequencing identified the strain as Aspergillus sclerotiorum. By qualitatively determining its cellulolytic, proteolytic and amylolytic and enzymatic activities, as well as the production of pigments and acids, we confirmed its paper deteriorating abilities. Quantitatively, we evaluated its total cellulase enzyme activities on filter paper (FPase) and &beta-endoglucanase, and FPase and &beta-endoglucanase; confirming low activities. Although its deteriorating abilities are weak, it poses a threat to the preservation of the document and is a potential health hazard to the people who refer to and archive these books.


A partir de uma mancha de bolor de um livro do Arquivo "Coronado" com valor patrimonial, obteve-se uma cepa fúngica mediante isolamento em meio de cultura micologica. A cepa foi Aspergillus sclerotiorum e identificou-se por sequenciação de ADN ribossomal. Avaliou-se e confirmou-se a sua capacidade deteriorantesobre o papel, ao determinar qualitativamente as atividades enzimáticas celulósica, proteolitica e amiolitica, assim como a produção de epigmentos e ácidos. Avaliaram-se quantitativamente as suas atividades enzimáticas celulase toral sobre o papel de filtro (FPasa) e &beta-endoglucanasa, FPasa e &beta-endoglucanasa; confirmando atividades baixas. Apesar da sua capacidade deteriorante ser discreta, resulta ser ameaçante para a conservação do documento e potencialmente perigoso para a saúde das pessoas que consultam e arquivam.

19.
Braz. j. microbiol ; 45(2): 743-751, Apr.-June 2014. ilus, tab
Article in English | LILACS | ID: lil-723113

ABSTRACT

The use of low cost agro-industrial residues for the production of industrial enzymes is one of the ways to reduce significantly production costs. Cellulase producing actinomycetes were isolated from soil and decayed agricultural wastes. Among them, a potential culture, strain NEAE-J, was selected and identified on the basis of morphological, cultural, physiological and chemotaxonomic properties, together with 16S rDNA sequence. It is proposed that strain NEAE-J should be included in the species Streptomyces albogriseolus as a representative of a novel sub-species, Streptomyces albogriseolus subsp. cellulolyticus strain NEAE-J and sequencing product was deposited in the GenBank database under accession number JN229412. This organism was tested for its ability to produce endoglucanase and release reducing sugars from agro-industrial residues as substrates. Sugarcane bagasse was the most suitable substrate for endoglucanase production. Effects of process variables, namely incubation time, temperature, initial pH and nitrogen source on production of endoglucanase by submerged fermentation using Streptomyces albogriseolus subsp. cellulolyticus have been studied. Accordingly optimum conditions have been determined. Incubation temperature of 30 ºC after 6 days, pH of 6.5, 1% sugarcane bagasse as carbon source and peptone as nitrogen source were found to be the optimum for endoglucanase production. Optimization of the process parameters resulted in about 2.6 fold increase in the endoglucanase activity. Therefore, Streptomyces albogriseolus subsp. cellulolyticus coud be potential microorganism for the intended application.


Subject(s)
Cellulase/isolation & purification , Cellulase/metabolism , Streptomyces/metabolism , Bacterial Typing Techniques , Cluster Analysis , Carbohydrates/analysis , Cellulose/metabolism , Culture Media/chemistry , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Hydrogen-Ion Concentration , Molecular Sequence Data , Phylogeny , /genetics , Sequence Analysis, DNA , Saccharum/metabolism , Streptomyces/classification , Streptomyces/growth & development , Streptomyces/isolation & purification , Temperature , Time Factors
20.
Article in English | IMSEAR | ID: sea-162913

ABSTRACT

Cellulose is an abundant natural biopolymer on earth and most dominating Agricultural waste. This cellulosic biomass is a renewable and abundant resource with great potential for bioconversion to value-added bioproducts. It can be degraded by cellulase produced by cellulolytic bacteria. This enzyme has various industrial applications and now considered as major group of industrial enzyme. The review discusses application of cellulase, classification of cellulase, quantification of cellulase, the types of cellulolytic bacteria and their screening. It describes the current knowledge of cellulase production by submerged fermentation and solid state fermentation, properties of cellulase and cloning and expression of cellulase gene. The biotechnological aspect of cellulase research and their future prospects are also discussed.

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